AME - Analysis of cortical thickness in aging and dementia

This project investigates how the thickness and shape of the brain’s cortex change throughout life, from infancy to old age, with a particular focus on aging and neurodegeneration (e.g., Alzheimer’s disease). The primary goal is to understand the mechanical and biological factors that govern cortical morphology. The REU student will work with publicly available MRI datasets (e.g., OASIS-3) to reconstruct cortical surfaces using Freesurfer, analyze cortical thickness and curvature metrics, and compare findings across different age groups and developmental stages. Tasks include segmentation quality control, computational surface analysis, statistical comparisons, and participation in data synthesis and manuscript preparation.

Name of research group, project, or lab
CoMMaND Lab
Why join this research group or lab?

This lab offers a unique and interdisciplinary environment where engineering principles are applied to understand complex biological systems, particularly the human brain. We use tools from mechanics, computation, and image analysis to investigate questions with direct relevance to neuroscience and public health.  

Students will benefit from close mentorship, frequent feedback, and meaningful professional development. The lab has a strong track record of undergraduate involvement: past REU students have co-authored published papers, contributed to successful grant proposals, and presented at national conferences. Group meetings foster collaboration, and weekly one-on-one meetings ensure personalized support.

 

Logistics Information:
Project categories
Aerospace and Mechanical Engineering
Applied and Computational Mathematics and Statistics
Student ranks applicable
Sophomore
Junior
Senior
Student qualifications

Students should have a background in engineering, computer science, neuroscience, or a related field. Prior experience with Python or other programming languages is helpful but not required. Attention to detail, willingness to learn new computational tools, and interest in brain development or mechanics will contribute to success in this project.

Hours per week
2 credits / 6-12 hours
3 credits / 12+ hours
Compensation
Research for Credit
Paid - General
Number of openings
1
Techniques learned
  • MRI image processing and cortical reconstruction using Freesurfer
  • Data analysis using Python
  • Scientific writing and presentations
Project start
Fall 2025
Contact Information:
Mentor
mhollan5@nd.edu
Associate Professor
Name of project director or principal investigator
Cameron Godin
Email address of project director or principal investigator
cgodin@nd.edu
1 sp. | 11 appl.
Hours per week
2 credits / 6-12 hours (+1)
2 credits / 6-12 hours3 credits / 12+ hours
Project categories
Aerospace and Mechanical Engineering (+1)
Aerospace and Mechanical EngineeringApplied and Computational Mathematics and Statistics