CBE - Investigating the Role of Cardiac-Resident Macrophages in Obese Heart

This project aims to engineer a physiologically relevant in vitro 3D human obese heart model incorporating hypertrophic adipocytes, human iPSC-derived atrial cardiomyocytes and macrophages to investigate metabolic, electrophysiological, and immunomodulatory mechanisms underlying obesity-induced cardiac dysfunction. Human adipose-derived stem cells will be bioprinted in hydrogels, differentiated into adipocytes, and stimulated with fatty acids to mimic high-fat diet conditions. These constructs will be cocultured with a-iCMs to assess myocardial glucose uptake, insulin receptor activation, cytokine profiles, contractile function, and gap junction integrity. Naïve macrophages will be introduced to evaluate their recruitment, polarization, phagocytic activity, and effects on cardiomyocyte function and remodeling. Students will participate in bioprinting, cell culture, molecular assays, live-cell imaging, and data analysis.

Name of research group, project, or lab
Zorlutuna Lab
Why join this research group or lab?

The Zorlutuna Lab at the University of Notre Dame is a dynamic, interdisciplinary environment combining 3D bioprinting, organ-on-chip systems, and stem cell biology to model complex human diseases. This project is critical because current in vitro cardiac models lack epicardial adipose tissue and immune components, limiting our understanding of obesity-related heart disease. By engineering a 3D human obese heart with hypertrophic adipocytes, hiPSC-derived cardiomyocytes, and macrophages, we aim to replicate key metabolic, inflammatory, and electrophysiological changes and uncover macrophage-driven repair mechanisms. Alongside this work, the lab pursues innovative studies on cardiac fibrosis, chemotherapeutic-induced cardiotoxicity, breast cancer mechanisms and tumor–stroma interactions, offering students a highly collaborative, technology-rich setting with strong translational impact.

Logistics Information:
Project categories
Chemical and Biomolecular Engineering
Student ranks applicable
First Year
Sophomore
Junior
Senior
Student qualifications

Successful participation in this project requires a background in biomedical engineering, bioengineering, cell biology, or a related life sciences field, with coursework or experience in cell culture, molecular biology techniques, and basic microscopy. 

Skills in sterile technique, handling primary or stem cell–derived cultures, and performing assays such as ELISA, western blotting, and immunostaining are highly valuable. Familiarity with 3D cell culture, bioprinting, or image analysis software is a plus, but can be learned on the job. Physical qualifications include the ability to stand for extended periods during cell culture and laboratory procedures when necessary, perform fine motor tasks with precision, and work in a laboratory environment with standard biosafety precautions. No work will be conducted outdoors or in extreme temperatures.

Hours per week
1 credit / 3-6 hours
2 credits / 6-12 hours
3 credits / 12+ hours
Compensation
Research for Credit
Number of openings
1
Techniques learned

3D Bioprinting using GelMA–collagen I hydrogels with a BioX6 printer 

Human cell culture and differentiation of adipose-derived stem cells-derived adipocytes, hiPSC-derived cardiomyocytes, and macrophages under sterile conditions 

Molecular assays including ELISA, western blotting, and quantitative protein/cytokine analysis 

Immunostaining and fluorescence microscopy 

Live-cell imaging and beating analysis (beating frequency, velocity, and confluency via vector heat maps)

 Metabolic assays for glucose uptake, insulin responsiveness, and mitochondrial function (Seahorse extracellular flux analysis)

Image analysis using software tools for quantifying cell morphology, gap junction integrity, and cytoskeletal organization 

Data analysis and interpretation for integrating metabolic, electrophysiological, and immunological readouts

Project start
08/25/2025
Contact Information:
Mentor
lcelebi@nd.edu
Graduate Student
Name of project director or principal investigator
Pinar Zorlutuna
Email address of project director or principal investigator
pzorlutu@nd.edu
1 sp. | 11 appl.
Hours per week
1 credit / 3-6 hours (+2)
1 credit / 3-6 hours2 credits / 6-12 hours3 credits / 12+ hours
Project categories
Chemical and Biomolecular Engineering